BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005G04SP1|AL425419
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1283 1841 0.0
>3x_Contig1283
Length = 6261
Score = 1841 bits (926), Expect = 0.0
Identities = 955/963 (99%), Gaps = 4/963 (0%)
Strand = Plus / Minus
Query: 1 actactggggacaagtttcgtggcatccttcgatcggaggcccatataaacagggcrtat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 2081 actactggggacaagtttcgtggcatccttcgatcggaggcccatataaacagggcgttt 2022
Query: 61 atcccccaaaamagcgttcgtacacaactgtctatctcagaaggatcatccactacgtca 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 --cccccaaaaaagcgttcgtacacaactgtctatctcagaaggatcatccactacgtca 1964
Query: 121 tgaaagattgamacatctccaatcaacctctcaagatcatgagactgttccaagacgact 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1963 tgaaagattgaaacatctccaatcaacctctcaagatcatgagactgttccaagacgact 1904
Query: 181 acctgtaagatgggaacatattcacaaaatgatccaaaaaaaccattaacatggcctaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1903 acctgtaagatgggaacatattcacaaaatgatccaaaaaaaccattaacatggcctaat 1844
Query: 241 tctgcagattcgctagtgacgtagcagctcactccgatagctctcccgtatgcatctact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1843 tctgcagattcgctagtgacgtagcagctcactccgatagctctcccgtatgcatctact 1784
Query: 301 gcaaatgatgtgttcaattgatttatcgtttggatccactgtatcccgctggctgctatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1783 gcaaatgatgtgttcaattgatttatcgtttggatccactgtatcccgctggctgctatg 1724
Query: 361 gcttgatatagtttcgcagttgaataattggcaactccaaacacagtacggcagttgagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1723 gcttgatatagtttcgcagttgaataattggcaactccaaacacagtacggcagttgagc 1664
Query: 421 tgaaataatctatgaaaaagatactcaggcaaaggtattagcggtgcgacattatacctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1663 tgaaataatctatgaaaaagatactcaggcaaaggtattagcggtgcgacattatacctc 1604
Query: 481 tcagtatagctcatctccttagcagcccctgagtgtatcagggtcttggtttccatcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1603 tcagtatagctcatctccttagcagcccctgagtgtatcagggtcttggtttccatcttt 1544
Query: 541 ttgtccgtcccagtatattcctgttaaacttttaattcgacttctcttcaaggaaaatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 ttgtccgtcccagtatattcctgttaaacttttaattcgacttctcttcaaggaaaatca 1484
Query: 601 attttgtcaagttagttcttgtacaggaaaatgtgacaaagaaaatgcaaagttacacga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 attttgtcaagttagttcttgtacaggaaaatgtgacaaagaaaatgcaaagttacacga 1424
Query: 661 tggacaaaaggtaacagtagtttttaagtactcaatcgcacgcacgtcatgtggctctta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 tggacaaaaggtaacagtagtttttaagtactcaatcgcacgcacgtcatgtggctctta 1364
Query: 721 ataggtgagtattgatattattatgaactgacaaggtgaaatccggtatgaaaaaggtag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 ataggtgagtattgatattattatgaactgacaaggtgaaatccggtatgaaaaaggtag 1304
Query: 781 gacggaagctagaaagaaaagtattgctataaaaggaagaattatgatgtccaagtgccc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 gacggaagctagaaagaaaagtattgctataaaaggaagaattatgatgtccaagtgccc 1244
Query: 841 ttttcctagtgaggaatagggaatgcttaacataaataaaaagaatccactgcccaatat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 ttttcctagtgaggaatagggaatgcttaacataaataaaaagaatccactgcccaatat 1184
Query: 901 gaacactattagggacaggatag-actataggtttt-cgaaagacattgaaatgaacttt 958
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 1183 gaacactattagggacaggatagaactataggttttccgaaagacattgaaatgaacttt 1124
Query: 959 aaa 961
|||
Sbjct: 1123 aaa 1121
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6317
Number of Sequences: 1807
Number of extensions: 6317
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)